Organic/Inorganic/Materials Faculty Introductions – December 6th

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

O-I-M Faculty Introductions – Fall 2024
Friday, December 6, 2024
3:00 pm, WIL 110

Christopher Hendon
Assistant Professor
Chemistry and Biochemistry
Hendon Lab

Celeste Melamed 
Assistant Professor – Fall 2025
Chemistry and Biochemistry


Dissertation Defense – Konnor Jones, December 3rd

Chemistry and Biochemistry Department
Upcoming Thesis Defense

Konnor Jones
Richmond Lab

Tuesday, December 3, 2024
10AM in 30 Pacific Hall and via Zoom
contact Chemistry and Biochemistry office for Zoom link

The title of his thesis is
Behavior of cationic:anionic surfactant mixtures at the oil-water interface


Physical Chemistry Seminar – Andrew H. Marcus, December 2nd


Department of Chemistry and Biochemistry
Physical Chemistry Seminar Series

Professor Andrew H. Marcus, University of Oregon
December 2, 2024 — 2:00pm
Tykeson 140

Title: Studies of local DNA structure and dynamics by nonlinear spectroscopy and single-molecule optical approaches

DNA contains the ‘genetic information’ that is encoded as specific DNA base sequences, and which is ‘read’ and ‘processed’ by proteins that interact with DNA at specific sites. The local conformations of DNA bases and sugar-phosphate backbones near single-stranded (ss) – double-stranded (ds) DNA junctions undergo thermally activated fluctuations (termed DNA ‘breathing’) within an unknown distribution of macrostates to permit the proper binding of proteins involved in core biochemical processes.

In this talk, I will discuss novel spectroscopic methods and analyses – both at the ensemble and single-molecule levels – to study structural and dynamic properties of exciton-coupled molecular dimer-labeled DNA constructs in which the dimer probes are inserted at key positions involved in protein-DNA complex assembly and function. The exciton-coupled dimer probes act as ‘sensors’ of the local conformations adopted by the DNA bases and backbones immediately adjacent to the probes. These methods can be used to study the biochemical mechanisms of protein-DNA recognition, complex assembly, and function in biological processes.


Organic/Inorganic/Materials Seminar – Robert Strongin, December 5th

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

Professor Robert Strongin, Portland State University
3:30 pm, 110 Fenton Hall
December 5, 2024 
Hosted by NRT

Title: Advances in Abiotic Biosensors and Targeted Molecular Probes

For the past three decades our group has addressed fundamental challenges in biomedical diagnostics. Applications have included the detection of cancer, cardiovascular disease and redox-related disorders. The general approach involves the development of design principles for transforming relatively simple pH dyes into inherently targeted, highly selective long wavelength and NIR-active agents that function without the need for conjugation to biomolecules. This has allowed us to develop abiotic chemical indicators to detect intriguing disease biomarkers such as specific sugars, amino acids and low-abundant phospholipids. In addition, molecular probes that target human pancreatic cancer tissue have been synthesized and evaluated.


Organic/Inorganic/Materials Seminar – Ben Bythell, November 22nd

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

Ben Bythell, Hazardous Materials Manager, Chemical Safety Officer
November 22, 2024
3:00 pm, WIL 110

Q & A Session to Follow

Hosted by the Chemistry and Biochemistry Department

Title: Hazardous Waste Determinations and New TSCA Legislation at University of  Oregon

New federal TSCA legislation for dichloromethane/ methylene chloride (DCM) requires the University of Oregon and other research-use employers to generate a monitoring program to ensure employee safety. I shall discuss why the law has changed, how the monitoring program will help keep you safe, and what this means for your research and teaching.

Hazardous waste determinations are legally required to occur at the point of generation, i.e., by the lab generator. Most labs do a great job of labeling hazardous waste containers with an accurately filled-in tag. Each lab (PI-responsible) must document how hazardous waste determinations occur for each major process. i.e., with SOPS, SDSs, and chemical knowledge. Dr. Bythell will guide you and your students through completing this process using an online form (~ 2 minutes to complete). I will cover how this reduces lab (PI and institutional) liability, how often to fill in the form, and how to avoid unnecessary work/duplication. Dr. Bythell will audit each of these hazardous waste determination documents promptly and provide PIs, students, and staff copies to show legal compliance has occurred.


Twisting Alkyne Cycloparaphenylenes into a Molecular Pinwheel – Jasti Lab in the News


Physical Chemistry Seminar – Evan Williams, November 18th

flyer with event informationDepartment of Chemistry and Biochemistry
Physical Chemistry Seminar Series

Professor Evan R. Williams – UC Berkeley
November 18, 2024 —2:00pm
Tykeson 140

Hosted by Jim Prell

Title: Overcoming Molecular Complexity One Ion at a Time

Heterogeneous materials can be challenging to analyze especially when the masses of individual components extend beyond 100 kDa.  With mass spectrometry, individual charge states produced by electrospray ionization can be difficult to resolve due to overlaps in m/z from other components or from adduction of salts or other non-specific molecular interactions.  One demonstrated solution to this problem of sample heterogeneity for high mass analytes is to measure the charge as well of the m/z of individual ions so that the mass of each ion can be determined without interference from other ions.  Single ion mass measurements have been performed with a variety of instrument types, but charge detection mass spectrometry with electrostatic ion traps have the advantage of virtually unlimited mass range, single charge accuracy, and the ability to make dynamic measurements.  A primary challenge is to acquire single ion data sufficiently rapidly to make this method practical.  Solutions to this challenge, as well as state of the art capabilities of charge detection mass spectrometry and applications to viral and nanoparticle analysis will be discussed. Results from experiments aimed at understanding the chemistry and physics of charged droplets will also be presented.


Dissertation Defense – Matthew Yglesias, November 14th

Flyer with event informationChemistry and Biochemistry Department
Upcoming Thesis Defense

Matthew Yglesias
DeRose Lab

Thursday, November 14th, 2024
12 PM in 116 Education

The title of his thesis is Disruption of Ribosome Biogenesis and Induction of Nucleolar Stress by Platinum(II)-based Chemotherapeutics”


Dissertation Defense – Liam Twight, November 12th

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Chemistry and Biochemistry Department
Upcoming Thesis Defense

Liam Twight
Boettcher Lab

Tuesday, November 12th, 2024
9am in 240D Willamette Hall and via Zoom
contact Chemistry and Biochemistry office for Zoom link

The title of his thesis is
“Advancing understanding of oxygen evolving active sites formed by iron adsorption and surface reconstruction of transition metal (hydr)oxide electrocatalysts for high performance alkaline water electrolysis”