Organic/Inorganic/Materials Seminar – Jonathan Kuo, January 31st

Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

Professor Jonathan Kuo, Penn State
January 31, 2025
3:00 pm, WIL 110
Hosted by ADSE

Comparing Metalloenzymatic Active Sites to Synthetic Model Complexes: Expanding Views on Supporting Ligands

Organic ligands alter the electronic structure and properties of the transition metals that they bind to. But what other functions can be programmed into metal/ligand complexes? In this talk, we will discuss how dynamic ligand features “unlock” key steps in (a) aerobic oxygenation and (b) electrophilic olefin activation. These dynamic features replicate dynamics present in enzymatic active sites. Recently, comparisons to enzymatic active sites have drawn us to host-guest-type ligand-metalate complexes – where the supporting ligand is designed to bind polyatomic metal anions [MO4]2– or [MCl4]2– via hydrogen bonding.


 

Physical Chemistry Seminar – Shaowei Li, January 27th

event flyerDepartment of Chemistry and Biochemistry
Physical Chemistry Seminar Series

Professor Shaowei Li, University of California San Diego
January 27, 2025 — 2:00pm, Tykeson 140
Hosted by: George Nazin

Title: On-Demand Control of Single-Molecule Chemistry through Vibrational Characterization and Manipulation

Chemical processes hinge on the dynamic rearrangement of nuclei within molecules. Controlling these motions with precision has been a long-standing goal in chemistry. My lab focuses on achieving this by manipulating interactions between individual molecules and their nanoscale environment. We engineer the potential energy surface at this scale to control molecular properties such as structure and reactivity. Using vibrational characterization techniques with scanning tunneling microscopy (STM)—including inelastic electron tunneling spectroscopy, action spectroscopy, and our recent advancement in single-molecule infrared absorption spectroscopy—we analyze molecular responses to the variation in the nano-chemical environment by examining their fingerprinting vibrational modes at the sub-molecular scale. By precisely tuning the junction geometry, material, and the interaction between the molecule and other surface entities, we can selectively influence specific bonds, paving the way for bond-selective control in chemistry.


 

Organic/Inorganic/Materials 3rd Year Talks – January 24th

event flyerOrganic/Inorganic/Materials Seminar Series
3rd Year Talks – Winter 2025

January 24, 2025
110 Willamette Hall

3:00pm – Nathan Boone
Utilizing Phosphorous-Fluorine Exchange (PFEx) in Azaphosphinine Heterocycles

3:30pm – Megan Rammer
Supramolecular Applications of Quadruply Hydrogen Bonding Azaphosphinines


 

Organic/Inorganic/Materials 3rd Year Talks – January 17th

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Organic/Inorganic/Materials Seminar Series
3rd Year Talks – Winter 2025

January 17, 2025
110 Willamette Hall

3:00pm – Christopher Griffin
Influence of Carboxylate-Pt (IV)-based Compounds on Nucleolar Response Pathways

3:30pm – Leif Lindberg
Platinum Compounds with Electronically Tunable Conjugated Ligands

Physical Chemistry Seminar – Jean K. Chung, January 13th

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Department of Chemistry and Biochemistry
Physical Chemistry Seminar Series

Professor Jean K. Chung, Colorado State University
January 13, 2025 — 2:00pm, Tykeson 140
Hosted by: Andrew Marcus

Title: Lipid Membrane Structure in Catalysis and Reactivity

The cellular membrane not only defines the boundary of the cell, but also mediates the communication with the environment and organizes vital processes in space and time. In the inflammation process, liberating polyunsaturated fatty acids from phospholipids. The fatty acids are then oxidized by lipoxygenase, which leads to the overall oxidation of the membrane that underlies aging and a host of diseases. Here, we explore how the structural integrity of the cell membrane is linked to both the hydrolysis of phospholipids by phospholipase A2 and lipid peroxidation by lipoxygenase. We use model membrane systems, such as lipid vesicles and supported lipid bilayers combined with fluorescence spectroscopy and imaging to investigate the reactions involved in membrane breakdown.

 

Organic/Inorganic/Materials Faculty Introductions – December 6th

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

O-I-M Faculty Introductions – Fall 2024
Friday, December 6, 2024
3:00 pm, WIL 110

Christopher Hendon
Assistant Professor
Chemistry and Biochemistry
Hendon Lab

Celeste Melamed 
Assistant Professor – Fall 2025
Chemistry and Biochemistry


Physical Chemistry Seminar – Andrew H. Marcus, December 2nd


Department of Chemistry and Biochemistry
Physical Chemistry Seminar Series

Professor Andrew H. Marcus, University of Oregon
December 2, 2024 — 2:00pm
Tykeson 140

Title: Studies of local DNA structure and dynamics by nonlinear spectroscopy and single-molecule optical approaches

DNA contains the ‘genetic information’ that is encoded as specific DNA base sequences, and which is ‘read’ and ‘processed’ by proteins that interact with DNA at specific sites. The local conformations of DNA bases and sugar-phosphate backbones near single-stranded (ss) – double-stranded (ds) DNA junctions undergo thermally activated fluctuations (termed DNA ‘breathing’) within an unknown distribution of macrostates to permit the proper binding of proteins involved in core biochemical processes.

In this talk, I will discuss novel spectroscopic methods and analyses – both at the ensemble and single-molecule levels – to study structural and dynamic properties of exciton-coupled molecular dimer-labeled DNA constructs in which the dimer probes are inserted at key positions involved in protein-DNA complex assembly and function. The exciton-coupled dimer probes act as ‘sensors’ of the local conformations adopted by the DNA bases and backbones immediately adjacent to the probes. These methods can be used to study the biochemical mechanisms of protein-DNA recognition, complex assembly, and function in biological processes.


Organic/Inorganic/Materials Seminar – Robert Strongin, December 5th

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

Professor Robert Strongin, Portland State University
3:30 pm, 110 Fenton Hall
December 5, 2024 
Hosted by NRT

Title: Advances in Abiotic Biosensors and Targeted Molecular Probes

For the past three decades our group has addressed fundamental challenges in biomedical diagnostics. Applications have included the detection of cancer, cardiovascular disease and redox-related disorders. The general approach involves the development of design principles for transforming relatively simple pH dyes into inherently targeted, highly selective long wavelength and NIR-active agents that function without the need for conjugation to biomolecules. This has allowed us to develop abiotic chemical indicators to detect intriguing disease biomarkers such as specific sugars, amino acids and low-abundant phospholipids. In addition, molecular probes that target human pancreatic cancer tissue have been synthesized and evaluated.


Organic/Inorganic/Materials Seminar – Ben Bythell, November 22nd

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Department of Chemistry and Biochemistry
Organic/Inorganic/Materials Seminar Series

Ben Bythell, Hazardous Materials Manager, Chemical Safety Officer
November 22, 2024
3:00 pm, WIL 110

Q & A Session to Follow

Hosted by the Chemistry and Biochemistry Department

Title: Hazardous Waste Determinations and New TSCA Legislation at University of  Oregon

New federal TSCA legislation for dichloromethane/ methylene chloride (DCM) requires the University of Oregon and other research-use employers to generate a monitoring program to ensure employee safety. I shall discuss why the law has changed, how the monitoring program will help keep you safe, and what this means for your research and teaching.

Hazardous waste determinations are legally required to occur at the point of generation, i.e., by the lab generator. Most labs do a great job of labeling hazardous waste containers with an accurately filled-in tag. Each lab (PI-responsible) must document how hazardous waste determinations occur for each major process. i.e., with SOPS, SDSs, and chemical knowledge. Dr. Bythell will guide you and your students through completing this process using an online form (~ 2 minutes to complete). I will cover how this reduces lab (PI and institutional) liability, how often to fill in the form, and how to avoid unnecessary work/duplication. Dr. Bythell will audit each of these hazardous waste determination documents promptly and provide PIs, students, and staff copies to show legal compliance has occurred.