Growing Knowledge – The evolution of research

The British Library has an exhibit on the evolution of scientific research.

Highlighted on the site are short (~ 4 min) videos about new methods of doing research and data-driven science, the role of the research library in support of e-science, and dealing with information overload.

How have digital technologies changed research? What are the new challenges they pose? What role should a research library play in the 21st Century? Growing Knowledge at the British Library explores these questions with our researchers in order to inform the debate on the future of research.

from: British Library – Growing Knowledge – The evolution of research.

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Input on Strategies to Encourage Broad Data Sharing in Environmental Health Sciences Research

The NIEHS is seeking input on ways to encourage broader data sharing among researchers in the field of environmental health sciences who are conducting clinical or epidemiologic studies. Input is being sought from the environmental health science extramural research community and other interested stakeholders. Information is requested regarding additional perspectives on what, if any, unique considerations exist for sharing of data in studies collecting environmental exposure information, what are the primary characteristics of successful data sharing resources and strategies in use currently by researchers, what are the barriers to broad sharing of data and what additional resources and tools are needed to promote timelier, more efficient sharing of environmental health science data.

via NOT-ES-11-009: Request for Information RFI: Input on Strategies to Encourage Broad Data Sharing in Environmental Health Sciences Research.

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Interdisciplinary Computing and Open Science

The Science Libraries will be hosting two sessions by Microsoft Research on May 24, to explore “Interdisciplinary Computing and Open Science”. Sessions will be from 10:30 – noon, and 1:30 – 3 pm, in room B90. Please register for the session you plan to attend so we can plan for refreshments.

Presenters: Dan Fay and Yan Xu, Microsoft Research

Interdisciplinary computing is becoming a new paradigm in academic research and education. Via interdisciplinary computing, computer science innovations are stimulated by real-world data and computational challenges; natural and social sciences are advanced by applying the new computing technologies to the transformation of data to information and to knowledge. By collaborating with academic partners in many difference fields, Microsoft has been a strong player in interdisciplinary computing over the last decade. Please join us to learn about Microsoft Research (MSR), their vision and strategy in interdisciplinary computing, examples of collaborations between MSR and the academia, and demos of MSR innovative software.

This event is also meant for you to rub elbows with your colleagues in other disciplines and with the Microsoft Research visitors and exchange experiences and thoughts about interdisciplinary computing. Please come with your questions and contribute to creating a mind-swap experience for the event.

Microsoft Research staff members Dan Fay and Yan Xu will lead the sessions. Dan Fay is director of the Earth, Energy, and Environment sector at Microsoft Research. Yan Xu is responsible for research partnerships with academia, industry, and government related to data mining, high-performance computing, workflow automation, and data visualization for research in earth, energy, and the environment.

For more information, contact Brian Westra, Lorry I. Lokey Science Data Services Librarian, 541-346-2654 , bwestra@uoregon.edu.

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Cloud computing increasingly attractive to universities, says JISC

JISC News release
16.5.2011

Cloud computing increasingly attractive to universities, says JISC

There is a “compelling case for using the cloud for research”, JISC’s innovation director for digital infrastructure argued last week.

Speaking at an ‘inside government’ forum on cloud in the public sector, Rachel Bruce said: “It’s clear that universities need the right infrastructure for the right job, and hybrid infrastructure with local and public provision is required.  But investment in the cloud is often driven by cost – so cloud computing is a particularly attractive option for smaller institutions who can’t afford to replace their physical hardware to do the same job.”

Rachel highlighted some of the reasons that universities are increasingly looking to use the cloud for their research services.

Cloud is attractive because it can help universities and similar organisations:

1.            Reduce environmental and financial costs – where functions are only needed for short periods, for example

2.            Share the load – when a university is working with a partner organisation so that neither organisation need develop or maintain a physical infrastructure

3.            Be flexible and pay as you go – researchers may need to use specialized web-based software that cannot be supported by in-house facilities or policies

4.            Access data centres, web applications and services from any location

5.            Make experiments more repeatable – write-ups of science experiments performed in the cloud can contain reference to cloud applications like a virtual machine, making the experiment easier to replicate

JISC committee member and Pro Vice Chancellor of Roehampton University, Chris Cobb, also addressed an Eduserv symposium last week on shared services.

He said: “With the universal drive for efficiencies, shared services has become even more topical. The key though is to examine opportunities at a process level and not as whole systems or organisational units. JISC is undertaking valuable work in supporting institutions in improved understanding of their processes and the relationship of processes to systems and physical infrastructure.

“Through this, institutions are better placed to take advantage of services orientated architecture, ‘software as a service’ and cloud based technologies to increase resilience and reduce costs. With cultural barriers to shared services now dissipating, the time is right to consider shared services more strategically and not just opportunistically as has been the case so far.”

JISC is currently working to help organisations better understand the costs of a cloud infrastructure and help them make decisions about how the cloud might fit their business models.

This includes delivering part of the Universities Modernisation Fund, a £12.5 million HEFCE fund that aims to help universities and colleges deliver better efficiency and value for money through shared services.

JISC is, for example, contributing funding to eleven pilot projects with the Engineering and Physical Sciences research council (EPSRC) to explore and develop new cloud computing technologies for research.

Find out how the pilots are going <http://cloudresearch.jiscinvolve.org/wp/about/>

JISC is also helping over 40 UK universities and colleges navigate through the steps needed to improve their IT service delivery for students and staff including evaluating the possibilities for cloud computing.

Read JISC’s tagged articles on cloud computing using the Delicious social bookmarking service <http://www.delicious.com/tag/cloudcomputing+jiscfsd>

Read what Publictechnology.net said about Rachel Bruce’s talk <http://www.publictechnology.net/sector/education/jisc-director-outlines-he-s-cloud-considerations>

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Think Quarterly – a Google publication for UK biz partners

Interesting reading from a Google publication directed toward their UK clients. Check out some of the articles highlighted below this quote from the Think Quarterly home page.

Like most companies, Google regularly communicates with our business customers via email newsletters, updates on our official blogs, and printed materials.

On this occasion, we’ve sent a short book about data, called Think Quarterly, to a small number of our UK partners and advertisers. You’re now on the companion website, thinkquarterly.co.uk (also available at m.thinkquarterly.co.uk, if you’re on the move).

We’re flattered by the positive reaction but have no plans to start selling copies! Although Think Quarterly remains firmly aimed at Google’s partners and advertisers, if you’re interested in the subject of data then please feel free to read on…

Some of the articles in this inaugural issue:

A Data State of Mind
Data superstar Hans Rosling explains why a fact-based worldview will transform your business.

Lunch with Hal
Hal Varian, Chief Economist at Google, sinks his teeth into data obesity and how to treat it.

Soft Values, Hard Facts
Peter Kruse has developed a tool that can tap into the intuitive beliefs that drive social change. By accessing the parts other data can’t reach, it offers you the most valuable insight of all: what’s coming next.

The Knowledge
Simon Rogers picks the 10 best places to see ‘sexy’ data online.

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FigShare Beta

FigShare allows you to share all of your data, negative results and unpublished figures. In doing this, other researchers will not duplicate the work, but instead may publish with your previously wasted figures, or offer collaboration opportunities and feedback on preprint figures.

via FigShare.

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Will Computers Crash Genomics?

Science: Will Computers Crash Genomics?

Should research focus on data analysis as much as or more than on data generation? The capacity to process and analyze data has not kept up to speed with the volume of data produced through high-throughput sequencing. This article digs into that issue, with related links and articles on analyzing and sharing data.

This News Focus article … [is] part of a collection this month reflecting on the 10th anniversary of the publication of the human genome. All the stories, and other related material, will be gathered at http://scim.ag/genome10

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What researchers want for research data support – A SURF Foundation Report

The full report can be found on the SURF Foundation site.

via SURF Foundation publications page:

A review of literature describing what researchers want with regard to storage of and access to research data

This publication reviews recent literature describing what researchers want with regard to data storage and access. It was commissioned by SURFfoundation. Fifteen recent sources were studied, covering the Netherlands, the UK, the USA, Australia, and Europe.

The main findings of the review are that researchers can benefit from support services in managing their digital data, although these services must meet a number of requirements if they are to be successful. Although there are major differences in the way disciplines conduct their research, there are also common factors across disciplines when it comes to research data storage and access.

The following factors play a role in making storage successful:

  • Tools and services must be in tune with researchers’ workflows, which are often discipline-specific and sometimes even project-specific
  • Researchers resist top-down and/or mandatory schemes.
  • Researchers favour a “cafeteria” model in which they can pick and choose from a set of services.
  • Tools and services must be easy to use.
  • Researchers must be in control of what happens to their data, who has access to it, and under what conditions. Consequently, they want to be sure that whoever is dealing with their data data centre, library, etc. will respect their interests.
  • Researchers expect tools and services to support their day-to-day work within the research project; long-term/public requirements must be subordinate to that interest.
  • The benefits of the support must clearly visible – not in three years’ time, but now.
  • Support must be local, hands-on, and available when needed.
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What Scientists Think about Open Access Publishing

Highlights from the SOAP project survey. What Scientists Think about Open Access Publishing was posted on arXiv.org

Abstract from arXiv.org:

The SOAP (Study of Open Access Publishing) project has run a large-scale survey of the attitudes of researchers on, and the experiences with, open access publishing.

Around forty thousands answers were collected across disciplines and around the world, showing an overwhelming support for the idea of open access, while highlighting funding and (perceived) quality as the main barriers to publishing in open access journals.

This article serves as an introduction to the survey and presents this and other highlights from a preliminary analysis of the survey responses. To allow a maximal re-use of the information collected by this survey, the data are hereby released under a CC0 waiver, so to allow libraries, publishers, funding agencies and academics to further analyse risks and opportunities, drivers and barriers, in the transition to open access publishing.

 

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