What Nature Publishing Group is up to

Cameron Neylon, in this post on his Science in the Open blog, digs into some of the details about open access publishing and what Nature Publishing Group (NPG) is doing to produce a PLoS-like publication. I know, not too exciting…

But worth a read for faculty in the sciences.

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Creating a Data Management Framework

The Australian National Data Service has released a guide titled: Creating a Data Management Framework

from announcement to Research Data Management list:

Creating a Data Management Framework is designed for institutions which
are committed to improving their research data management
infrastructure.
http://ands.org.au/guides/dmframework/data-management-framework.html

The Framework outlines four basic elements required within an
institutional context to support effective data management.  These are:

 *   Institutional policy and procedures (see http://ands.org.au/guides/dmframework/dmf-policies-and-procedures.html for further detail),
 *   IT Infrastructure: the hardware, software and other facilities which underpin data-related activities, (see http://ands.org.au/guides/dmf-it-infrastructure.html for further detail)
 *   Support services: people and other means of providing advice and
support, such as web-pages (further information forthcoming), and
 *   Metadata management: so that data records can be used for both
internal and external purposes (further information forthcoming).

Metadata Storage Solutions provides details of various approaches being
taken by ANDS partners to provide effective metadata storage for their
institutions.  See http://ands.org.au/guides/metadata-stores-solutions.html

Coming soon: ANDS Guide to What is Research Data?

With best wishes,

Margaret Henty
Program Leader, Skills Resources & Policy
Australian National Data Service

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Managing Your Data

The UO Libraries and partners have created a set of pages for guidance on managing research data, with materials on the new NSF Data Management Plan requirement.

We’re here to answer questions about plans and help with resources to fill in any gaps.

We’ll also be offering training, probably on a quarterly basis. The next session for training will be on Thursday, January 27, from noon – 1 pm in B90 in the Science Library.

The site covers the following topics:

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New National Academies title: Conducting Biosocial Surveys

excerpt,by the NCBI bookshelf, and available as a free pdf download:

Recent years have seen a growing tendency for social scientists to
collect biological specimens, such as blood, urine, and saliva as part
of large-scale household surveys. By combining biological and social
data, scientists are opening up new fields of inquiry and are able for
the first time to address many new questions and connections. But
including biospecimens in social surveys also adds a great deal of
complexity and cost to the investigator’s task. Along with the usual
concerns about informed consent, privacy issues, and the best ways to
collect, store, and share data, researchers now face a variety of issues
that are much less familiar or that appear in a new light.

In
particular, collecting and storing human biological materials for use in
social science research raises additional legal, ethical, and social
issues, as well as practical issues related to the storage, retrieval,
and sharing of data. For example, acquiring biological data and linking
them to social science databases requires a more complex informed
consent process, the development of a biorepository, the establishment
of data sharing policies, and the creation of a process for deciding how
the data are going to be shared and used for secondary analysis—all of
which add cost to a survey and require additional time and attention
from the investigators. These issues also are likely to be unfamiliar to
social scientists who have not worked with biological specimens in the
past. Adding to the attraction of collecting biospecimens but also to
the complexity of sharing and protecting the data is the fact that this
is an era of incredibly rapid gains in our understanding of complex
biological and physiological phenomena. Thus the trade-offs between the
risks and opportunities of expanding access to research data are
constantly changing.

This report, which was funded by the National
Institute on Aging (NIA), offers findings and recommendations
concerning the best approaches to the collection, storage, use, and
sharing of biospecimens gathered in social science surveys and the
digital representations of biological data derived therefrom. It is
aimed at researchers interested in carrying out such surveys, their
institutions, and their funding agencies.

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The Language of Data

In a brief Wired column, Clive Thompson addresses the importance for all of us to hone our data “reading” skills, with statistics as the “grammar”. I think I need to break out my Biometry textbook.

These kinds of skills are one aspect of a recent proposal by several faculty to create a Program in Statistics, Informatics and Applied Mathematics (PSIAM) at the University of Oregon. I’ll post the outcome when I hear from the faculty.

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Data management plans – a satirical view

The news of NSF’s impending requirement for data management plans has prompted a few more or less humorous responses.

For instance, see this data management plan from the Daily Life in an Ivory Basement blog. I’m not sure that I agree with the sentiment expressed toward the NSF, but some of the descriptions for the current data management practices are unfortunately pretty close to the norm.

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NSF to require data management plans

From the May 10, 2010 NSF press announcement:

During the May 5th meeting of the National Science Board, National Science Foundation (NSF) officials announced a change in the implementation of the existing policy on sharing research data. In particular, on or around October, 2010, NSF is planning to require that all proposals include a data management plan in the form of a two-page supplementary document. The research community will be informed of the specifics of the anticipated changes and the agency’s expectations for the data management plans.

Seidel acknowledged that each discipline has its own culture about data-sharing, and said that NSF wants to avoid a one-size-fits-all approach to the issue. But for all disciplines, the data management plans will be subject to peer review, and the new approach will allow flexibility at the directorate and division levels to tailor implementation as appropriate.

This is a change in the implementation of NSF’s long-standing policy that requires grantees to share their data within a reasonable length of time, so long as the cost is modest.

Seidel noted that requiring the data management plans was consistent with NSF’s mission and with the growing interest from U.S. policymakers in making sure that any data obtained with federal funds be accessible to the general public. Along with other federal agencies, NSF is subject to the Open Government Directive, an effort of the Obama administration to make government more transparent and more participatory.

Contact Brian Westra, Lorry I. Lokey Science Data Services Librarian, for help with your data management plan.

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Open Science presentation at CNI

from the Coalition for Networked Information (CNI):

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Open Science – An Introduction

I attended the Science Commons Symposium a few weeks back, which gave me a chance to meet several chemists who use Open Notebook Science (ONS). This, along with the recent seminar by Jim Reichman, got me thinking about Open Science and what it might mean to researchers who are accustomed to a more traditional approach.

Let’s start off with defining Open Science, which has several aspects (and should not be confused with Open Source Science):

  • Transparency in experimental methodology, observation, and collection of data.
  • Public availability and reusability of scientific data.
  • Public accessibility and transparency of scientific communication.
  • Using web-based tools to facilitate scientific collaboration.

This list, and resources like Cameron Neylon’s Science in the Open blog are a good starting point, and there are many other resources on the web, as well as articles in the libraries’ research databases and journal subscriptions. Here’s a recent article in Science Careers: Scientists Embrace Openness

There are a wide range of options and degrees of participation available to the researcher. Whether someone is publishing in Open Access journals, or doing scientific collaboration, they are helping to facilitate open science.

One example of a broader effort under way is the Open Science Grid, which is active in a number of fields, including Physics, Biology, Chemistry, GIS, Materials Science, and nanotechnology.

I’ll follow up with more about Open Notebook Science in another post.

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